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NeuroTools

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NeuroTools is a collection of tools to support all tasks associated with a neural simulation project which are not handled by the simulation engine.

Purpose

* The signals module provides core functionality that allows manipulation of and calculations with spike trains and analog signals.
* The spike2 module offers an easy way for reading data from CED's Spike2 Son files into the NeuroTools enviroment.
* The parameters module contains classes to make managing large, hierarchical parameter sets easier.
* The analysis module contains miscellaneous analysis functions.
* The stgen module contains various stochastic process generators relevant for Neuroscience (OU, poisson, inhomogenous gamma, ...).
* The utilities sub-package contains srblib, an easy-to-use interface for interacting with SRB servers.
* The io module is the gateway for all reading/writing of files, in different formats, in NeuroTools.
* The plotting module contains a collection of tools for plotting and image processing, based on Matplotlib and the Python Imaging Library.
* The datastore resents a consistent interface for persistent data storage (e.g., for caching intermediate results), irrespective of storage back-end.

License

GNU General Public License

Prerequirements

POSIX, Python environment

Ease of Use

Intermediate

Maturity

Experimental

Operating system

Any
Unix-like

Downloads

This tool has been downloaded 251 times.
  • 2 files
  • 4 external documentation item
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