PyDSTool

Object Tabs

Simulation and analysis scripting environment environment for dynamical systems models of biophysical systems (ODEs, DAEs, maps, and hybrid systems)

Purpose

Supports symbolic math expressions and modular template descriptions for building complex models, optimization/parameter estimation, numerical continuation, bifurcation analysis, data analysis (e.g. dimension estimation), and other features. There are toolboxes specifically for computational neuroscience applications (geared to small networks), e.g. phase planes, phase response curves, multi-compartment neuron and network templates.

License

BSD License

Prerequirements

All platforms. Python + Numpy + Scipy needed. Matplotlib recommended. Optional C compiler to use the fast ODE integrators.

Ease of Use

Intermediate

Maturity

Intermediate

Operating system

Any
PyDSTool

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