Waxholm Space is a coordinate-based reference space for the mapping and registration of neuroanatomical data in the mouse brain.

Here you can download image volumes representing the canonical Waxholm Space (WHS) mouse brain. These images include T1-, T2*-, and T2-Weighted MR volumes (generated at the Duke Center for In-Vivo Microscopy), Nissl-stained optical histology (acquired at Drexel), and a label volume describing 37 structures. All volumes are represented at 21.5μ isotropic resolution.

License
CC-BY

Prerequirements

Atlases are provided as gzipped NIFTI file (no decompression necessary for many viewers, e.g., FreeSurfer, FSLView). Smaller, downsampled volumes at 43μ resolution are also available.

Ease of Use
Anyone can use it

Maturity
Intermediate

Operating System
Any