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43 tools found in: Neuroimaging

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Name	Rating	Modification Date	Maturity	Downloads	Image
XML-Based Clinical Experiment Data Exchange Schema (XCEDE) 2.0		May 12, 2010	Stable
The XCEDE schema provides an extensive metadata hierarchy for describing and documenting research and clinical studies.
Whole Brain Catalog		May 12, 2010	Intermediate
An open source multi-scale virtual catalog of the mouse brain..
Waxholm Space Atlas		Oct 20, 2012	Intermediate
2409 downloads Waxholm Space is a coordinate-based reference space for the mapping and registration of neuroanatomical data in the mouse brain..
Visn		Apr 05, 2013	Planning
Visn software..
TRENTOOL		Sep 17, 2012	Stable
Trentool is a software for transfer entropy analysis in neural data.
TrakEM2		Apr 08, 2011	Stable
Software for neural circuit reconstruction from LSM or EM image data sets.
The Neurophysiological Biomarker Toolbox (NBT)		Jun 27, 2012	Planning
The Neurophysiological Biomarker Toolbox (NBT) is an open source Matlab toolbox for the computation and integration of neurophysiological biomarkers..
SynD - Synapse and neurite detection		Nov 12, 2012	Intermediate
192 downloads SynD is an automated image analysis routine to analyze dendrite and synapse characteristics in immuno-fluorescence images.
SynapseEM		Aug 31, 2011	Intermediate
Program for analyzing electron microscopic (EM) images of synapses..
Sumatra		Oct 18, 2012	Intermediate
418 downloads Sumatra is a tool for managing and tracking projects based on numerical simulation and/or analysis, with the aim of supporting reproducible research..

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