http://software.incf.org daily 1 2009-11-01T22:39:39Z http://software.incf.org/software/csa This is a demonstration implementation in Python of the Connection-Set Algebra (Djurfeldt, 2009, submitted). The Connection-Set Algebra (CSA) is a novel notation for the description of connectivity in neuronal network models. Both the connection structure, that is which connections exist, and parameters associated with connections can be described. An elementary set of connection patterns, \emph{connection-sets}, are provided as well as a set of rules for how to compute new connection-sets from elementary ones. The code is not optimized for performance but rather for ease of understanding. An optimized C++ library is being developed. No publisher mdjurfeldt computational neuroscience modeling simulator connectivity 2012-04-24T08:05:59Z Software http://software.incf.org/software/eeg-erp-portal EEG/ERP portal enables community researchers to store, update, download and search data and metadata from EEG/ERP experiments. The system is developed as a standalone product; the database access is available through a web interface. No publisher Pitrs data/metadata sharing ERP database experiments EEG web interface 2012-04-11T13:40:55Z Software http://software.incf.org/software/neuroshare-matlab-library This is a matlab library for reading/writing Neuroshare (.nsn) files in Matlab. This was created by the Department of Neuroinformatics at ATR for use on http://brainliner.jp No publisher mtakemiya data-sharing neuroshare matlab library atr 2012-04-06T16:51:47Z Software http://software.incf.org/software/done-detection-of-outlier-neurons This tool implements a morphology-based approach for the automatic identification of outlier neurons. No publisher CFeenders neuron feature-space archetype outlier 2012-04-02T10:17:25Z Software http://software.incf.org/software/neuronvisio Neuronvisio is a Graphical User Interface for NEURON simulator enviroment. Neuronvisio connect with NEURON using the new python NEURON interface. No publisher mattions visualization neuron 2012-03-19T11:25:14Z Software http://software.incf.org/software/lfpy LFPy is a Python module for simulations of extracellular field potentials No publisher ehagen local field potentials extracellular field potentials EEG NEURON Python LFP 2012-03-14T12:53:51Z Software http://software.incf.org/software/pandora Database analysis and visualization of simulated and recorded electrophysiological data No publisher cengique database interface data analysis data formats data visualization database computational neuroscience Neuronal Characterization OS Independent development environment MATLAB Linux neuroinformatics analyze neurophysiology matlab 2012-03-12T17:58:14Z Software http://software.incf.org/software/dae-tools A cross-platform equation-oriented process modelling and optimization software No publisher dnikolic Visualization Modelling Simulation C++ Modeling 2012-02-27T15:14:49Z Software http://software.incf.org/software/neo Neo is a package for representing electrophysiology data in Python, together with support for reading a wide range of neurophysiology file formats, including Spike2, NeuroExplorer, AlphaOmega, Axon, Blackrock, Plexon, Tdt, and support for writing to a subset of these formats plus non-proprietary formats including HDF5. No publisher andrewdavison 2012-02-02T15:21:03Z Software http://software.incf.org/software/mexi MEXI, MUSIC EXternal Interface, is a generic interface making MUSIC-enabled applications running on super-computers capable of communicating with the outside world. No publisher ali_nazem Parallel Neural Networks MUSIC External Interface MUSIC 2012-02-01T22:53:29Z Software